rs761212 chr20:51781462 C>T
- Sequence
atagatgactagacatcattgtta[C/T]gtaattgcagttattttaaaagga
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ATF2_HUMAN CREB1_HUMAN FOXA2_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 3.76 | -3.45 | 1.00 | n/a | No Hit | |||
| CREB1_HUMAN | 1.83 | 0.08 | 1.17 | -3.92 | Concordant | |||
| FOXA2_HUMAN | 0.76 | -0.54 | 1.25 | n/a | No Hit | |||
| ATF7_HUMAN | 2.66 | -2.36 | 1.00 | n/a | n/a | |||
| CEBPA_HUMAN | 2.14 | n/a | 1.50 | 1.25 | Weak Discordant |
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Motif analysis
