ADASTRA v5.1.3
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rs7624838
chr3:184011323
G
>
A
Sequence
gataaaaatctactctcaaacatc[G/A]tagccattagggaactgcaaatta
ASB in cell types
T47D (invasive ductal carcinoma)
MCF7 WS8 cells
ASB for transcription factors
FOXA1_HUMAN
PRGR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
1.06
0.27
5.7·10
-4
1.00
2.01
n/a
No Hit
PRGR_HUMAN
1.19
0.13
0.01
0.86
3.76
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Brain_Cerebellum
,
Brain_Frontal_Cortex_BA9
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Pituitary
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)