rs7625401 chr3:10169258 G>C
- Sequence
gtcccactgggcacgcattgtctt[G/C]ataaacatcttaacaggaaacagg
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) A549 (lung carcinoma) EA.hy 926 (human umbilical vein endothelial cell line) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- TF65_HUMAN HIF1A_HUMAN EP300_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 1.73 | n/a | 3.00 | n/a | No Hit | |||
| HIF1A_HUMAN | 2.86 | n/a | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 2.48 | -1.70 | 2.00 | n/a | n/a |
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