rs7636380 chr3:16060702 T>C
- Sequence
tgccttacactctctgccctcagg[T/C]tcttactgtccttaggggtggaaa
- ASB in cell types
- HKC8 (kidney proximal tubule cell line) tibial nerve heart left ventricle HepG2 (hepatoblastoma)
- ASB for transcription factors
- GCR_HUMAN CTCF_HUMAN EPAS1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.11 | 1.01 | 1.54 | -0.17 | Weak Discordant | |||
| CTCF_HUMAN | 1.52 | 0.87 | 1.61 | n/a | No Hit | |||
| EPAS1_HUMAN | 0.34 | 1.55 | 1.00 | n/a | No Hit |
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Motif analysis
