ADASTRA v5.1.3
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Bill Cipher
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs7637099
chr3:33097057
G
>
A
Sequence
agaagcagcagaaccagcaacaga[G/A]ggaggatgcgaaccaggaaccccg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
neural cell
ASB for transcription factors
HMGB1_HUMAN
STAT1_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HMGB1_HUMAN
3.23
-3.10
3.5·10
-4
1.00
1.00
n/a
n/a
STAT1_HUMAN
0.24
1.75
0.98
0.03
1.75
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
fasting blood glucose
,
hdl cholesterol
,
ldl cholesterol change with statins
,
resistance to kuru in aged women despite likely exposure
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)