rs76400633 chr7:4641825 T>C
- Sequence
tgcgcaagcgcaggaggagcagcg[T/C]ggcgcaaccttaaggcgcatgcgc
- ASB in cell types
- HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium) breast tumor
- ASB for transcription factors
- GCR_HUMAN NRF1_HUMAN ESR1_HUMAN RFOX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.65 | 0.05 | 1.00 | n/a | No Hit | |||
| NRF1_HUMAN | 1.85 | -3.13 | 1.50 | 1.55 | Weak Discordant | |||
| ESR1_HUMAN | 2.82 | n/a | 2.00 | n/a | No Hit | |||
| RFOX2_HUMAN | 1.71 | n/a | 1.25 | n/a | n/a | |||
| GABP1_HUMAN | 1.56 | -1.37 | 1.00 | n/a | n/a |
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Motif analysis
