rs76441646 chr17:68457203 C>T

Sequence
aaggggtacggggataacaagatc[C/T]caatgcgtccgaagcagacaccgg
ASB in cell types
22RV1 (prostate carcinoma) monocytes from periferal blood
ASB for transcription factors
SRBP2_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN 1.94 -0.87 0.021.00 2.00 n/a No Hit
ANDR_HUMAN 2.28 -0.89 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Esophagus_Mucosa,  Heart_Left_Ventricle,  Muscle_Skeletal,  Ovary,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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