rs7648216 chr3:142886938 C>T

Sequence
tgaaagaagctctcagtgaaccaa[C/T]gtattcaattactaaacaacttcc
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMCA4_HUMAN SMRC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN -0.92 1.85 1.001.2·10-3 1.10 n/a n/a
SMRC1_HUMAN 0.55 1.56 1.000.01 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Esophagus_Muscularis Nerve_Tibial Skin_Sun_Exposed_Lower_leg

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