rs76868266 chr19:43596055 G>C

Sequence
cagcagctgagaagcccggcccct[G/C]ggccgcggcggacggaggccgaag
ASB in cell types
CD14+ monocytes MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line)
ASB for transcription factors
STAT1_HUMAN JUN_HUMAN CDN1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 3.34 n/a 1.8·10-41.00 2.00 n/a No Hit
JUN_HUMAN 0.59 1.81 1.002.4·10-3 1.85 n/a No Hit
CDN1B_HUMAN 0.13 1.02 1.000.05 2.00 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid

Download