rs770028 chr1:9110819 G>A

Sequence
ggaaaagttaggtgagttatttgc[G/A]tcactgattgtgaaattccacagt
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.65 0.40 0.041.00 1.28 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP irritible bowel syndrome
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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