rs7710 chr19:10115580 A>G

Sequence
gcggcggtggaagctgatgaaggc[A/G]aagccctgtggaggggcgggatgg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
SFPQ_HUMAN AGO2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SFPQ_HUMAN n/a 3.62 1.004.5·10-3 3.00 n/a n/a
AGO2_HUMAN 0.36 1.51 0.980.04 1.33 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP refractive error
GTEx eQTL Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Cerebellum Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Muscularis Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

Download