rs7718810 chr5:113032603 C>G

Sequence
accagtggacagtgctgctctaga[C/G]caattgtttaatgctgtcagaggc
ASB in cell types
MDA-MB-231ERb(triple negative breast cancer)
ASB for transcription factors
ESR2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR2_HUMAN -3.81 1.49 1.000.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  diastolic blood pressure (dbp),  systolic blood pressure (sbp)
GTEx eQTL Artery_Aorta,  Breast_Mammary_Tissue,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Ovary,  Skin_Not_Sun_Exposed_Suprapubic,  Small_Intestine_Terminal_Ileum,  Testis,  Thyroid,  Whole_Blood

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