rs7728528 chr5:58810468 T>G
- Sequence
tgttttgagatatgatcattacta[T/G]ttaatatgatcttctcaagaagcc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.15 | 1.45 | 1.78 | -4.09 | Discordant | |||
| FOXA1_HUMAN | -0.44 | 1.50 | 2.36 | n/a | No Hit |
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Motif analysis
