rs7752759 chr6:112180266 A>C

Sequence
gaaaaatgtcatgcctataagaaa[A/C]cctcttctttttgacaaacgccag
ASB in cell types
erythroid progenitors GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
erythroid progenitors n/a 3.27 1.001.2·10-3 2.00
GM12878 (female B-cells lymphoblastoid cell line) 0.38 0.94 0.827.0·10-3 1.13
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Motif analysis

No data available

Genetic associations

GRASP infant head circumference
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

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