rs7762393 chr6:158558472 T>C

Sequence
agaaccaacaggttcaaaggactt[T/C]ggggctgcaacgtggttagacaac
ASB in cell types
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.81 0.24 8.1·10-31.00 1.02
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Motif analysis

No data available

Genetic associations

GRASP asthma,  obesity with early age of onset (age >2),  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Hippocampus,  Brain_Putamen_basal_ganglia,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Nerve_Tibial,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Spleen,  Thyroid,  Whole_Blood

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