rs77802091 chr21:42818389 T>C
- Sequence
ctctcccttccttaataatttagt[T/C]taaaatctattagactgagcaagg
- ASB in cell types
- IPSC-derived bipolar neuron T47D (invasive ductal carcinoma) GM19238 (female B-cells lymphoblastoid cell lines) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.85 | 1.33 | 1.45 | n/a | No Hit | |||
| STAG1_HUMAN | 0.32 | 0.81 | 1.08 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Muscle_Skeletal, Thyroid, Whole_Blood