rs78037977 chr1:172746562 A>G
- Sequence
gttgactttcctctgaggagtaag[A/G]gtgacccttgcttaaaaggacaac
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma) CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAT1_HUMAN TCF21_HUMAN RELB_HUMAN DAXX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.38 | -0.11 | 1.50 | n/a | No Hit | |||
| TCF21_HUMAN | 2.59 | -4.47 | 1.50 | n/a | n/a | |||
| RELB_HUMAN | -2.71 | 2.93 | 1.00 | n/a | No Hit | |||
| DAXX_HUMAN | -4.42 | 1.96 | 2.00 | n/a | n/a | |||
| ETS1_HUMAN | -1.47 | 1.73 | 1.00 | n/a | No Hit |
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Motif analysis
