rs78145249 chr7:108525379 G>A
- Sequence
caggattatatgatagtcccttat[G/A]tcacaactctcctgagtttttcct
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma) monocytes from periferal blood GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ANDR_HUMAN SRBP2_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.97 | -5.29 | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.85 | n/a | 3.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.63 | -0.94 | 4.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg