rs78201932 chr3:195748091 G>C

Sequence
gctggcggagggcccggagcccag[G/C]tctgcgtggggccgcggcttcctg
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.86 -1.87 1.5·10-61.00 1.00 n/a No Hit
STAG1_HUMAN 2.93 -2.59 2.1·10-51.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Tibial Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Thyroid

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