rs78291648 chr3:192957772 G>A
- Sequence
gaccctttcagctgcacctcaact[G/A]tcactccctgtcttcagttctcag
- ASB in cell types
- macrophages HCASMC (Human coronary artery smooth muscle cells) MV-4-11 (Childhood acute monocytic leukemia)
- ASB for transcription factors
- TCF21_HUMAN CEBPB_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 3.32 | n/a | 2.00 | n/a | n/a | |||
| CEBPB_HUMAN | 2.78 | -0.02 | 1.57 | n/a | No Hit | |||
| SPI1_HUMAN | 1.30 | 0.55 | 2.00 | -0.22 | Weak Concordant |
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Motif analysis
