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rs783 chr22:29065634 G>A

Sequence
agaatattctatgctttgttaaac[G/A]gaaagggaagcaggtagctgaaga
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
ETS1_HUMAN CDK9_HUMAN FLI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ETS1_HUMAN 1.97 -0.73 8.5·10-31.00 1.00 n/a No Hit
CDK9_HUMAN 2.01 -0.93 8.6·10-30.97 1.00 n/a n/a
FLI1_HUMAN 2.06 -1.72 0.041.00 1.00 -0.32 Weak Concordant
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Motif analysis

FLI1_HUMAN Weak Concordant
FLI1_HUMAN pic

Genetic associations

GRASP infant head circumference ldl cholesterol urinary albumin-to-creatinine ratio waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Breast_Mammary_Tissue Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Ovary Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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