ADASTRA v5.1.3
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rs7834818
chr8:123517137
A
>
G
Sequence
cgggtcggcttttgaagggcagtc[A/G]gctgtgcactgtgactcatcactg
ASB in cell types
breast tumor
monocytes from periferal blood
HEK293 (embryonic kidney)
MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
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(+2 others)
ASB for transcription factors
SRBP2_HUMAN
JUN_HUMAN
SMCA4_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN
2.46
1.04
2.3·10
-3
0.71
2.75
n/a
No Hit
JUN_HUMAN
1.32
-0.04
3.7·10
-3
1.00
2.50
n/a
No Hit
SMCA4_HUMAN
1.03
0.54
0.02
0.91
1.23
n/a
n/a
Items per page:
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Motif analysis
No data available
Genetic associations
GRASP
alzheimers disease
,
autism
,
autism with verbal ability
GTEx eQTL
Brain_Putamen_basal_ganglia
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)