rs78444094 chr15:92683573 C>G
- Sequence
aagagtgtttgtgatccccctgcc[C/G]gtaaacatacaaacaacaactcca
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) neural progenitors adrenal gland right lobe of liver
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.09 | 2.94 | 1.77 | 4.38 | Concordant | |||
| STAG1_HUMAN | n/a | 3.47 | 3.50 | n/a | n/a | |||
| RAD21_HUMAN | 0.05 | 2.05 | 1.62 | n/a | n/a |
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Motif analysis
