rs78542030 chr2:9814061 T>C
- Sequence
cttagggctaagcgccctggcccc[T/C]ctggatgaaccagcaagggcggag
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte 22RV1 (prostate carcinoma) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.93 | 0.26 | 1.51 | n/a | No Hit | |||
| ANDR_HUMAN | 2.24 | -0.94 | 2.00 | n/a | No Hit |
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