rs7866740 chr9:5450529 C>G
- Sequence
cgcaacgctgagcagctggcgcgt[C/G]ccgcgcggccccagttctgcgcag
- ASB in cell types
- HepG2 (hepatoblastoma) erythroid cells 22RV1 (prostate carcinoma) primary B-CLL cells
- ASB for transcription factors
- LMBL2_HUMAN MAX_HUMAN ANDR_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| LMBL2_HUMAN | -3.45 | 3.50 | 1.00 | n/a | n/a | |||
| MAX_HUMAN | -0.31 | 2.52 | 1.12 | 5.69 | Concordant | |||
| ANDR_HUMAN | 3.21 | n/a | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 2.03 | n/a | 4.00 | n/a | n/a | |||
| ELF3_HUMAN | -2.84 | 2.74 | 1.00 | n/a | No Hit |
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Motif analysis
