rs787332 chr10:28811942 T>C
- Sequence
atgagataggaggttggcacaaag[T/C]acaggtcacaaaggccttgctgat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NR2C1_HUMAN CAVN1_HUMAN KDM1A_HUMAN PTTG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | 0.03 | 2.15 | 2.00 | 1.98 | Weak Concordant | |||
| CAVN1_HUMAN | n/a | 2.30 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | -4.62 | 2.30 | 2.00 | n/a | n/a | |||
| PTTG1_HUMAN | n/a | 2.47 | 2.00 | n/a | n/a | |||
| RFX1_HUMAN | n/a | 1.48 | 2.00 | n/a | No Hit |
Items per page:
1 – 5 of 11
Motif analysis
