rs789680 chr10:14396914 A>G
- Sequence
ccctctctgatccagagcacacca[A/G]cttctggtatcataagaagaatag
- ASB in cell types
- BEAS-2B (bronchial epithelium) foreskin keratinocyte
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.68 | 1.12 | 1.00 | -1.75 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP homa-b, ldl cholesterol change with statins, longstanding arthritis, total cholesterol, variant creutzfeldt-jakob disease