rs790103 chr3:122651935 A>C

Sequence
tccaacagacctgcagctgaggga[A/C]ctgactgttagacggaaaattaac
ASB in cell types
LNCaP (prostate carcinoma) HepG2 (hepatoblastoma) pancreas
ASB for transcription factors
ANDR_HUMAN RERE_HUMAN CEBPA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.66 -0.07 3.9·10-131.00 2.08 n/a No Hit
RERE_HUMAN 2.47 n/a 0.031.00 1.00 n/a n/a
CEBPA_HUMAN 2.37 -4.37 0.031.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cortex Muscle_Skeletal Testis

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