ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs7909072
chr10:95236214
T
>
C
Sequence
caaaatccaaatcatgactgttaa[T/C]gtctttgtaaatgagtcagacctg
ASB in cell types
BEAS-2B (bronchial epithelium)
MDA-MB-231 (breast adenocarcinoma)
ASB for transcription factors
GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN
0.55
1.10
1.00
3.9·10
-3
1.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
asthma
,
diastolic blood pressure (dbp)
,
systolic blood pressure (sbp)
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Brain_Frontal_Cortex_BA9
,
Brain_Nucleus_accumbens_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Nerve_Tibial
,
Pituitary
,
Small_Intestine_Terminal_Ileum
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)