rs7920217 chr10:103908414 C>T
- Sequence
gcagctacacagtaccgcctgggc[C/T]gctggccttgtttcagctgcggga
- ASB in cell types
- HCT-116 (colon carcinoma) BEAS-2B (bronchial epithelium) hiPSC derived It-NES neural progenitors
- ASB for transcription factors
- GCR_HUMAN CHD7_HUMAN STAT1_HUMAN FOSL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.97 | 0.76 | 1.25 | n/a | No Hit | |||
| CHD7_HUMAN | 2.68 | -2.78 | 1.00 | n/a | n/a | |||
| STAT1_HUMAN | 2.73 | n/a | 2.00 | n/a | No Hit | |||
| FOSL1_HUMAN | 3.34 | n/a | 2.00 | n/a | No Hit | |||
| FOSL2_HUMAN | 2.01 | -0.27 | 1.50 | n/a | No Hit |
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Motif analysis
