rs79372785 chr11:102268858 T>C

Sequence
cccagagagctccggcagccccag[T/C]catccccggcaatcaggaggcagc
ASB in cell types
GM02610 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi) HeLa-Tet-On
ASB for transcription factors
STAG1_HUMAN RAD21_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN -2.13 2.32 1.006.6·10-4 1.00 n/a n/a
RAD21_HUMAN -0.22 1.59 1.000.01 1.12 n/a n/a
CTCF_HUMAN 0.37 1.59 1.000.02 1.40 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

No data available

Download