rs79408927 chr10:79537236 T>A
- Sequence
cttaaagtataataataataataa[T/A]aaaaataaaaaatcagagctttat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte RWPE2 epithelial cell of prostate
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.07 | 0.77 | 1.68 | n/a | No Hit | |||
| STAG1_HUMAN | 1.15 | -1.15 | 2.00 | n/a | n/a |
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