ADASTRA v5.1.3
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Bill Cipher
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rs7943722
chr11:119381738
C
>
T
Sequence
gtctcgcgtcactgagtcgcgtca[C/T]ggctattggcttgttcctactgtg
ASB in cell types
HEK293 (embryonic kidney)
22RV1 (prostate carcinoma)
GM12878 (female B-cells lymphoblastoid cell line)
HEK293T (embryonic kidney)
ASB for transcription factors
RBM25_HUMAN
ZF69B_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN
-0.23
1.41
1.00
7.3·10
-3
1.50
n/a
n/a
ZF69B_HUMAN
-1.69
2.04
1.00
0.04
1.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
total cholesterol
GTEx eQTL
Artery_Aorta
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Pituitary
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)