rs7946524 chr11:46122904 C>T

Sequence
taaaaaatcttagattaaaaaaaa[C/T]ccctactggacagtgatattatct
ASB in cell types
adrenal gland GM19099 (female B-cells Lymphoblastoid Cell Lines) transverse colon
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.23 -1.26 4.9·10-101.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  eur students <30 digit symbol,  height,  total cholesterol,  transmission distortion
GTEx eQTL Adipose_Visceral_Omentum,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Spleen,  Whole_Blood

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