rs7967482 chr12:20141038 C>T
- Sequence
atggaaggggctctctggtcccta[C/T]tcataaatcacagaatacatcgtt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- PKNX1_HUMAN RAD51_HUMAN MTA2_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | 2.74 | -2.62 | 1.00 | n/a | No Hit | |||
| RAD51_HUMAN | 2.54 | -2.26 | 1.00 | n/a | n/a | |||
| MTA2_HUMAN | 2.56 | n/a | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.23 | -2.35 | 1.00 | n/a | No Hit |
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