rs79688352 chr17:14203602 T>A
- Sequence
tgcccctagtgtcactctgcactc[T/A]gtgctgttgaggaatacagatcag
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) CD34+ hematopoietic stem cells-derived proerythroblasts Peyer's patch upper lobe of left lung
- ASB for transcription factors
- CTCF_HUMAN GATA1_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.18 | 1.90 | 1.42 | n/a | No Hit | |||
| GATA1_HUMAN | 2.82 | -5.34 | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | -2.71 | 2.93 | 1.00 | n/a | n/a |
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