rs7978856 chr12:75390993 C>T
- Sequence
ccccctcctccctcctttgttttt[C/T]cctcctccctcctccctttctcct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- PKNX1_HUMAN CTCF_HUMAN VEZF1_HUMAN MAZ_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | -1.00 | 0.96 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.61 | 0.84 | 1.30 | n/a | No Hit | |||
| VEZF1_HUMAN | -1.28 | 2.35 | 2.00 | 1.26 | Weak Concordant | |||
| MAZ_HUMAN | -1.79 | 2.08 | 1.00 | -1.46 | Weak Discordant | |||
| RBBP5_HUMAN | 2.17 | n/a | 2.50 | n/a | n/a |
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Motif analysis
