rs79924697 chr7:156640261 G>A
- Sequence
cctcgactaacagcgcagcgaagg[G/A]gcggtgcgctcgagaccctggaac
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma) MCF-7 C4-12 (invasive breast ductal carcinoma)
- ASB for transcription factors
- ZFX_HUMAN RFOX2_HUMAN NRF1_HUMAN MGAP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 2.74 | 1.55 | 2.38 | n/a | No Hit | |||
| RFOX2_HUMAN | n/a | 3.61 | 1.75 | n/a | n/a | |||
| NRF1_HUMAN | -0.04 | 0.92 | 1.62 | 0.43 | Weak Concordant | |||
| MGAP_HUMAN | n/a | 1.00 | 1.50 | n/a | n/a | |||
| ANDR_HUMAN | 2.92 | 0.08 | 1.67 | n/a | No Hit |
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Motif analysis
