rs80106255 chr11:13463070 T>G
- Sequence
gcctcccgcgccgcccccgccgag[T/G]tccccagctgagtccactcactct
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma) CD14+ monocytes
- ASB for transcription factors
- ANDR_HUMAN RFOX2_HUMAN VEZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.21 | -1.13 | 2.50 | n/a | No Hit | |||
| RFOX2_HUMAN | -0.90 | 1.91 | 2.00 | n/a | n/a | |||
| VEZF1_HUMAN | -1.04 | 1.86 | 2.00 | -2.17 | Discordant |
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Motif analysis
