rs8057898 chr16:84505048 T>C

Sequence
gtgaagacacccgggggaggagag[T/C]ggcccatgtggagcccatgcagag
ASB in cell types
HCT-116 (colon carcinoma) primary B-CLL cells 22RV1 (prostate carcinoma) HepG2 (hepatoblastoma)
ASB for transcription factors
TYY1_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN -1.74 2.53 1.000.02 2.00 n/a No Hit
ANDR_HUMAN -0.51 2.41 1.000.03 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose chronic kidney disease college completion mitral annular calcium serum creatinine
GTEx eQTL Brain_Cerebellar_Hemisphere Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Nerve_Tibial Testis Whole_Blood

Download