rs8064817 chr17:80892150 C>T
- Sequence
aaaagcgcaggggccgtcttcctg[C/T]gatgagtaatttcatcacactgct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02255 (Lymphoblastoid Cell Lines) CAR-T cells GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN ATF7_HUMAN IRF4_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.68 | 0.17 | 1.32 | n/a | No Hit | |||
| ATF7_HUMAN | 3.17 | -2.85 | 1.00 | n/a | n/a | |||
| IRF4_HUMAN | 1.27 | -1.16 | 1.17 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.23 | -2.40 | 1.50 | n/a | No Hit | |||
| RAD51_HUMAN | 2.59 | -2.46 | 1.00 | n/a | n/a |
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