rs8089314 chr18:50287879 T>C
- Sequence
ttcgccgggaacatggccgcgctc[T/C]aatgtggctttcccgagggcgccg
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) breast tumor CD14+ monocytes
- ASB for transcription factors
- TYY1_HUMAN ESR1_HUMAN ZBT11_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 0.91 | 0.42 | 1.00 | n/a | No Hit | |||
| ESR1_HUMAN | n/a | 3.93 | 2.00 | n/a | No Hit | |||
| ZBT11_HUMAN | n/a | 2.21 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | -0.01 | 1.00 | 1.60 | n/a | No Hit | |||
| STAT1_HUMAN | 0.14 | 1.88 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Tibial, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial, Thyroid