rs8100724 chr19:29213103 A>C

Sequence
cgggcgcgaacgggcctgagcggg[A/C]tgctaccgacaacatggcgacagc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN n/a 3.17 1.009.3·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP eye color,  fasting blood glucose,  homa-ir,  refractive error,  stabilized warfarin dose
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Nucleus_accumbens_basal_ganglia,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Muscularis,  Nerve_Tibial,  Pancreas

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