rs8109071 chr19:15113414 G>C
- Sequence
catgccaatcagaggcctagttgc[G/C]taagcaaccagtcctagctctgcc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- PKNX1_HUMAN RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | 0.17 | 3.63 | 2.00 | n/a | No Hit | |||
| RFX1_HUMAN | n/a | 2.76 | 2.50 | 4.51 | Concordant |
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Motif analysis
