rs8119088 chr20:10674863 C>A

Sequence
gccctccccggcccgacgccccgg[C/A]cgcagtgccgggattgcacctgta
ASB in cell types
22RV1 (prostate carcinoma) testis glioblastoma cells spleen
ASB for transcription factors
CTCF_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.88 0.60 3.9·10-31.00 1.26 n/a No Hit
ANDR_HUMAN 2.74 -1.23 6.1·10-31.00 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP lumbar spine bone mineral density (bmd)

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