rs812 chr8:98045298 G>A
- Sequence
ctcacatctgcccgccctggccaa[G/A]acatctctccacgtgaatcgtctt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) MDA-MB-231 (breast adenocarcinoma) A549 (lung carcinoma)
- ASB for transcription factors
- CLOCK_HUMAN BRD2_HUMAN SMAD3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CLOCK_HUMAN | -3.55 | 3.59 | 1.00 | n/a | No Hit | |||
| BRD2_HUMAN | 0.31 | 1.48 | 2.92 | n/a | n/a | |||
| SMAD3_HUMAN | 1.81 | 0.28 | 1.00 | n/a | No Hit |
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