rs8136533 chr22:17219394 C>T

Sequence
agaaactgagggctgtttgctcag[C/T]gccccagcatctgtgcagagcacc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) naive IgD+ B cells
ASB for transcription factors
FOXP1_HUMAN NFAC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXP1_HUMAN 0.46 2.76 0.730.01 1.83 n/a No Hit
NFAC3_HUMAN 2.31 -1.97 0.031.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Lung Spleen Whole_Blood

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