rs8175 chr4:113761410 A>G

Sequence
caagaagagggggccgggaaatgg[A/G]aaaacagccaggcacgggacgagt
ASB in cell types
MV-4-11 (Childhood acute monocytic leukemia) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN ENL_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.20 -0.39 0.030.99 1.83 0.49 Weak Discordant
ENL_HUMAN 2.05 -0.16 0.041.00 1.17 n/a n/a
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) body mass index (bmi) college completion diastolic blood pressure (dbp) ldl cholesterol systolic blood pressure (sbp) years of education
GTEx eQTL Esophagus_Mucosa

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