rs818515 chr1:84753686 A>T
- Sequence
acttgaaagggaggacatctcacc[A/T]gcgggggacagcgctgcagaaccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) testis neural cell upper lobe of left lung
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.76 | 0.36 | 1.41 | -2.73 | Concordant | |||
| RAD21_HUMAN | 1.56 | 0.32 | 1.45 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
