ADASTRA v5.1.3
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rs8192431
chr15:72200011
G
>
A
Sequence
gagagggtgcaaagccttgcccag[G/A]gtcagagctagctgcttcctgtca
ASB in cell types
glioblastoma cells
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
glioblastoma cells
1.79
-3.28
0.02
1.00
1.50
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
height
,
infant head circumference
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
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